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Simulations
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Person
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RNDr. Ivan Barvík Ph.D.
Academic staff at Faculty of Mathematics and Physics
12 classes
115 publications
Classes
class
Computer Modelling of Biomolecules
NBCM316 |
Faculty of Mathematics and Physics
class
Molecular dynamics I
NBCM346 |
Faculty of Mathematics and Physics
class
Molecular dynamics II
NBCM347 |
Faculty of Mathematics and Physics
class
Numerical Methods of Experimental Data Processing
NMAF035 |
Faculty of Mathematics and Physics
class
Molecular dynamics - calculations of free energy
NBCM181 |
Faculty of Mathematics and Physics
class
Fundamentals of Computer Physics I
NBCM321 |
Faculty of Mathematics and Physics
class
Fundamentals of Computer Physics II
NBCM322 |
Faculty of Mathematics and Physics
class
Introductory seminar on computational physics
NEVF067 |
Faculty of Mathematics and Physics
class
Numerical Methods of Computational Physics I
NEVF523 |
Faculty of Mathematics and Physics
class
Numerical Methods of Computational Physics II
NEVF529 |
Faculty of Mathematics and Physics
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Publications
publication
Complex between Human RNase HI and the phosphonate-DNA/RNA duplex: Molecular dynamics study
2013 |
Faculty of Mathematics and Physics
publication
Substrate recognition by norovirus polymerase: microsecond molecular dynamics study
2013 |
Faculty of Mathematics and Physics
publication
Computer modeling of biomolecules
2011 |
Faculty of Mathematics and Physics
publication
3'-Deoxy phosphoramidate dinucleosides as improved inhibitors of hepatitis C virus subgenomic replicon and NS5B polymerase activity
2010 |
Faculty of Mathematics and Physics
publication
E. Coli RNase HI and the Phosphonate-DNA/RNA Hybrid: Molecular Dynamics Simulations
+1
2005 |
Faculty of Mathematics and Physics
publication
Molecular dynamics simulations of interstrand linkers stabilizing double/triple helical nucleic acids potentially usable in antisense/antigene therapy
2004 |
Faculty of Mathematics and Physics
publication
MD Simulations Highlight the Ability of Antisense Nucleic Acids to Hybridize with the Target mRNA Sequence and Their Potency to Elicit RNase H Activity
2004 |
Faculty of Mathematics and Physics
publication
MD Simulations Shed Light on the Ability of Phosphonate Antisense Nucleic Acids to Hybridize with mRNA and to Elicit RnaseH Activity
2004 |
Faculty of Mathematics and Physics
publication
Molecular dynamics simulations of the complex between E.coli RNase HI and the phosphate/phosphonate DNA:RNA hybrid
2004 |
Faculty of Mathematics and Physics
publication
Molecular dynamics simulations of DNA triplexes containing modified Hoogsteen strands - potential candidates for antigene therapy
2003 |
Faculty of Mathematics and Physics
Load more publications (105)
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