- Geopolitical Studies🇬🇧 NMgr. | Faculty of Social Sciences
- International Security Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Peace and Conflict Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Strategic and War Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Global and Regional Security🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Security, Technology and Society🇨🇿 NMgr. | Faculty of Social Sciences
- International Master in Security, Intelligence and Strategic Studies (IMSISS)🇬🇧 NMgr. | Faculty of Social Sciences
- Law and Jurisprudence🇨🇿 Mgr. | Faculty of Law
- Archaelogy of Prehistory and Middle Ages +1🇨🇿 Bc. | Faculty of Arts
- Gender Studies +1🇨🇿 NMgr. | Faculty of Humanities
- Media and Area studies🇬🇧 NMgr. | Faculty of Social Sciences
- General Medicine🇨🇿 Mgr. | Second Faculty of Medicine
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Czech-German Studies🇨🇿 Bc. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Physical Geography and Geoecology +1🇨🇿 PhD. | Faculty of Science
- Parasitology and Infection Biology🇬🇧 NMgr. | Faculty of Science
- Reproduction and Developmental Biology🇨🇿 NMgr. | Faculty of Science
- Ibero-American Studies with double curriculum study History – General History with specialisation in Modern History with regard to European History🇨🇿 NMgr. | Faculty of Arts
- Ancient Egypt and the Near East with specialisation in Egyptology with double curriculum study History – General History with specialisation in Modern History with regard to European History🇨🇿 NMgr. | Faculty of Arts
- Archaeology of Prehistory and Middle Ages +1🇨🇿 PhD. | Faculty of Arts
- Film Studies +1🇨🇿 PhD. | Faculty of Arts
- History – General History with specialisation in Modern History with regard to European History🇨🇿 NMgr. | Faculty of Arts
- History – General History with specialisation in Modern History with regard to European History with double curriculum study Political Theories🇨🇿 NMgr. | Faculty of Arts