- International Security Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Peace and Conflict Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Strategic and War Studies🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Global and Regional Security🇨🇿 NMgr. | Faculty of Social Sciences
- International Security Studies with specialisation in Security, Technology and Society🇨🇿 NMgr. | Faculty of Social Sciences
- Geopolitical Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Adult education and educational management +1🇨🇿 NMgr. | Faculty of Education
- Computer Science with specialisation in Computer Graphics, Vision and Game Development🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Web and Data Oriented Programming🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Artificial Intelligence🇨🇿 Bc. | Faculty of Mathematics and Physics
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and the International Economy with respect to Economy🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- German and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- History and Area Studies🇬🇧 Bc. | Faculty of Social Sciences
- Teacher Training For Primary Schools🇨🇿 Mgr. | Faculty of Education
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- History🇨🇿 Bc. | Faculty of Arts
- Political and Regional Geography🇨🇿 NMgr. | Faculty of Science
- English and American Studies🇨🇿 Bc. | Faculty of Arts
