- Economics and Finance🇨🇿 Bc. | Faculty of Social Sciences
- Social Sciences🇬🇧 Bc. | Faculty of Social Sciences
- Information, media and book culture🇨🇿 NMgr. | Faculty of Arts
- Teacher Education of Art Education for Lower and Upper Secondary Schools and Basic Art Schools🇨🇿 NMgr. | Faculty of Education
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Parasitology and Infection Biology🇬🇧 NMgr. | Faculty of Science
- History – European Studies with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- Comparative Linguistics with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- Classical Archaeology with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- History with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- Intercultural Communication: Translation and Interpreting with specialisation in English for Translation and Interpreting with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- Ethnology and Cultural Anthropology with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- Corporate Strategy and Finance in Europe🇬🇧 NMgr. | Faculty of Social Sciences
- Politics, Philosophy and Economics🇬🇧 Bc. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Bioinformatics🇨🇿 NMgr. | Faculty of Science
- Computer Science with specialisation in Web and Data Oriented Programming🇨🇿 Bc. | Faculty of Mathematics and Physics
- Social Epidemiology🇨🇿 NMgr. | Faculty of Science
- International Masters in Economy, State and Society with specialisation in Politics and the International Economy with respect to Economy🇬🇧 NMgr. | Faculty of Social Sciences
- Germanic and North European Studies with specialisation in German Studies🇨🇿 Bc. | Faculty of Arts
- Religious Studies🇨🇿 NMgr. | Faculty of Arts
- Czech Language – Specialization Studies with double curriculum study Information, media and book culture🇨🇿 NMgr. | Faculty of Arts
- Germanic and North European Studies with specialisation in Dutch Studies with double curriculum study Information, media and book culture🇨🇿 NMgr. | Faculty of Arts
- School Management🇨🇿 Bc. | Faculty of Education
- Theoretical and Evolutionary Biology🇨🇿 PhD. | Faculty of Science
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
