- Central European Studies with specialisation in Hungarian Studies with double curriculum study South East European Studies🇨🇿 NMgr. | Faculty of Arts
- South East European Studies🇨🇿 NMgr. | Faculty of Arts
- Probability, Mathematical Statistics and Econometrics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics with specialisation in Theory of Probability🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics with specialisation in Mathematical Statistics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Mathematical Analysis🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Physics🇨🇿 Bc. | Faculty of Mathematics and Physics
- Theoretical Physics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Psychology🇨🇿 NMgr. | Faculty of Arts
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Biology🇨🇿 Bc. | Faculty of Science
- Hydrology and Hydrogeology +1🇨🇿 Bc. | Faculty of Science
- Geotechnology🇨🇿 Bc. | Faculty of Science
- Applied Geology with specialisation in Hydrogeology🇨🇿 NMgr. | Faculty of Science
- Applied Geology with specialisation in Engineering geology🇨🇿 NMgr. | Faculty of Science
- Applied Geology with specialisation in Applied geophysics🇨🇿 NMgr. | Faculty of Science
- Geophysics and Planetary Science🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Catholic Theology🇨🇿 Mgr. | Catholic Theological Faculty
- Chemistry🇨🇿 Bc. | Faculty of Science
- Medicinal Chemistry🇨🇿 Bc. | Faculty of Science
- Chemistry and Physics of Materials🇨🇿 Bc. | Faculty of Science
- Theoretical and Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Law and Jurisprudence🇨🇿 Mgr. | Faculty of Law