- Physical Education and Sport🇬🇧 NMgr. | Faculty of Physical Education and Sport
- International Relations🇨🇿 NMgr. | Faculty of Social Sciences
- Chemistry for Teacher Education with double curriculum study Physics for Teacher Education🇨🇿 Bc. | Faculty of Science
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Social Sciences🇬🇧 Bc. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Coach🇨🇿 Bc. | Faculty of Physical Education and Sport
- Computational Mathematics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Mathematics for Information Technologies +1🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Environmental Science🇨🇿 PhD. | Faculty of Science
- Molecular and Cellular Biology, Genetics and Virology🇨🇿 PhD. | Faculty of Science
- Mathematics for Teacher Education with double curriculum study Chemistry for Teacher Education +1🇨🇿 Bc. | Faculty of Education
- Chemistry for Teacher Education with double curriculum study Mathematics for Teacher Education +1🇨🇿 Bc. | Faculty of Education
- Neurology and Psychiatry🇨🇿 PhD. | Faculty of Medicine in Pilsen
- Computational mathematics +1🇨🇿 PhD. | Faculty of Mathematics and Physics
- Ibero-American Studies +1🇨🇿 PhD. | Faculty of Arts
- Computer Science with specialisation in General Computer Science🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Systems Programming🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science - Software Systems🇨🇿 PhD. | Faculty of Mathematics and Physics
- Ancient Egypt and the Near East with specialisation in Egyptology🇨🇿 NMgr. | Faculty of Arts
- Ancient Egypt and the Near East with specialisation in Assyriology🇨🇿 NMgr. | Faculty of Arts
- Physics Education and General Problems of Physics +1🇨 🇿 PhD. | Faculty of Mathematics and Physics