- Political Science🇨🇿 NMgr. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Public and Social Policy🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Geopolitical Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Mathematical Analysis🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Teacher Education of Chemistry for Upper Secondary Schools with double curriculum study Teacher Education of Physics for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Probability, Mathematical Statistics and Econometrics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics with specialisation in Theory of Probability🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Political Science and International Relations🇨🇿 Bc. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- German and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Journalism with specialisation in Political Journalism🇨🇿 NMgr. | Faculty of Social Sciences
- Journalism with specialisation in Sports Journalism🇨🇿 NMgr. | Faculty of Social Sciences
- Journalism with specialisation in Cultural Journalism🇨🇿 NMgr. | Faculty of Social Sciences
- Journalism with specialisation in Visual Journalism🇨🇿 NMgr. | Faculty of Social Sciences
- Journalism with specialisation in Digital Journalism🇨🇿 NMgr. | Faculty of Social Sciences
- Journalism with specialisation in Media Content Creation🇨🇿 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Financial Mathematics🇨🇿 Bc. | Faculty of Mathematics and Physics
- Strategic communication🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology of Contemporary Societies with specialisation in Civil Society and Politics🇬🇧 NMgr. | Faculty of Social Sciences