- Computer Science with specialisation in Systems Programming +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Computer Graphics, Vision and Game Development +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in General Computer Science +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Programming and Software Development +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- General Medicine🇨🇿 Mgr. | Second Faculty of Medicine
- Dentistry🇨🇿 Mgr. | Faculty of Medicine in Pilsen
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Chemistry for Teacher Education with double curriculum study Physics for Teacher Education🇨🇿 Bc. | Faculty of Science
- Physics for Teacher Education with double curriculum study Computer Science for Teacher Education🇨🇿 Bc. | Faculty of Mathematics and Physics
- Physics for Teacher Education with double curriculum study Mathematics for Teacher Education🇨🇿 Bc. | Faculty of Mathematics and Physics
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Bioinformatics🇨🇿 NMgr. | Faculty of Science
- Computer Science with specialisation in Web and Data Oriented Programming🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Artificial Intelligence🇨🇿 Bc. | Faculty of Mathematics and Physics
- Mathematics for Information Technologies🇨🇿 Bc. | Faculty of Mathematics and Physics
- Financial and Insurance Mathematics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics with specialisation in Mathematical Statistics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Economics and Finance with specialisation in Financial Markets and Data Analysis🇨🇿 NMgr. | Faculty of Social Sciences