- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Earth Sciences🇨🇿 Bc. | Faculty of Science
- Geography for Teacher Education🇨🇿 Bc. | Faculty of Science
- Applied Geography with specialisation in Physical Geography and Geoinformatics🇨🇿 Bc. | Faculty of Science
- Applied Geography with specialisation in Social Geography and Geoinformatics🇨🇿 Bc. | Faculty of Science
- Physics🇨🇿 Bc. | Faculty of Mathematics and Physics
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Science🇬🇧 Bc. | Faculty of Science
- Geology with specialisation in Geoarchaeology🇨🇿 Bc. | Faculty of Science
- Chemistry for Teacher Education with double curriculum study Geology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Czech-German Studies🇨🇿 Bc. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and the International Economy with respect to Economy🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- German and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Geology with specialisation in Geodynamics🇨🇿 NMgr. | Faculty of Science
- Bioinformatics🇨🇿 NMgr. | Faculty of Science
- Organic Chemistry🇨🇿 NMgr. | Faculty of Science
- Medicinal Chemistry🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Biology for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Biology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Teacher Education of Biology for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Chemistry for Upper Secondary Schools with double curriculum study Teacher Education of Biology for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Geoinformatics, Cartography and Remote Sensing🇨🇿 NMgr. | Faculty of Science
- Religious Studies🇨🇿 Bc. | Faculty of Arts
