- Political and Regional Geography🇨🇿 NMgr. | Faculty of Science
- Chemistry for Teacher Education🇨🇿 Bc. | Faculty of Science
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- German and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Teacher Training in Vocational Education and Training🇨🇿 Bc. | Faculty of Education
- Applied Sport Science🇨🇿 NMgr. | Faculty of Physical Education and Sport
- Geoinformatics, Cartography and Remote Sensing🇨🇿 NMgr. | Faculty of Science
- Dentistry🇨🇿 Mgr. | First Faculty of Medicine
- Clinical and Toxicological Analysis🇨🇿 Bc. | Faculty of Science
- Chemistry for Teacher Education with double curriculum study Physics for Teacher Education🇨🇿 Bc. | Faculty of Science
- Chemistry for Teacher Education with double curriculum study Mathematics for Teacher Education🇨🇿 Bc. | Faculty of Science
- Chemistry for Teacher Education with double curriculum study Geology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Chemistry for Teacher Education with double curriculum study Biology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Chemistry🇨🇿 Bc. | Faculty of Science
- Physiotherapy🇨🇿 Bc. | Faculty of Physical Education and Sport
- Orthotics - Prosthetics🇨🇿 Bc. | Faculty of Physical Education and Sport
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Physical Education and Sport🇬🇧 NMgr. | Faculty of Physical Education and Sport
- Social Sciences for Teacher Education with double curriculum study Czech Language for Teacher Education🇨🇿 Bc. | Faculty of Education
- Social Sciences for Teacher Education with double curriculum study Physical Education for Teacher Education🇨🇿 Bc. | Faculty of Education
- Social Sciences for Teacher Education with double curriculum study History for Teacher Education🇨🇿 Bc. | Faculty of Education
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Jewish Studies with double curriculum study Hussite Theology +1🇨🇿 Bc. | Hussite Theological Faculty