- German Language and Literature +1🇨🇿 Bc. | Faculty of Arts
- Psychology +1🇨🇿 NMgr. | Faculty of Arts
- Geobiology🇨🇿 NMgr. | Faculty of Science
- Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Protistology🇨🇿 NMgr. | Faculty of Science
- Theoretical and Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Botany with specialisation in Bryology and lichenology🇨🇿 NMgr. | Faculty of Science
- Botany with specialisation in Mycology🇨🇿 NMgr. | Faculty of Science
- Botany with specialisation in Algology and algal ecology🇨🇿 NMgr. | Faculty of Science
- Musicology +1🇨🇿 NMgr. | Faculty of Arts
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and the International Economy with respect to Economy🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- Russian Studies (study programme named after Boris Nemtsov)🇷🇺 NMgr. | Faculty of Arts
- English and American Studies🇨🇿 Bc. | Faculty of Arts
- Hebrew and Jewish Studies🇨🇿 Bc. | Faculty of Arts
- Pharmaceutical Sciences🇬🇧 NMgr. | Faculty of Pharmacy in Hradec Králové
- Sociology with specialisation in Sociology, Public and Politics🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Social Anthropology and Qualitative Research🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Applied Research and Its Methodology🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
