- Humanities and Social Sciences🇨🇿 Bc. | Faculty of Humanities
- History - Czech History in European Context🇨🇿 NMgr. | Faculty of Arts
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Theological Studies🇨🇿 Bc. | Catholic Theological Faculty
- Protestant Theology🇨🇿 Bc. | Protestant Theological Faculty
- Russian Language and Literature🇨🇿 NMgr. | Faculty of Arts
- Greek and Latin Studies with specialisation in Medieval Latin Studies with double curriculum study History – General History with specialisation in Civilization and Culture of the Medieval Europe🇨🇿 NMgr. | Faculty of Arts
- Russian Studies (study programme named after Boris Nemtsov)🇷🇺 NMgr. | Faculty of Arts
- History – General History🇨🇿 NMgr. | Faculty of Arts
- History – General History with specialisation in Civilization and Culture of the Medieval Europe🇨🇿 NMgr. | Faculty of Arts
- History – General History with specialisation in Civilization and Culture of the Medieval Europe with double curriculum study Greek and Latin Studies with specialisation in History of Ancient Civilization🇨🇿 NMgr. | Faculty of Arts
- Religious Studies🇨🇿 Bc. | Faculty of Arts
- Czech Language and Literature for Teacher Education🇨🇿 Bc. | Faculty of Arts
- Teacher Education of Czech Language and Literature for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Arts
- Czech Language and Literature +2🇨🇿 NMgr. | Faculty of Arts
- Comparative Literature +1🇨🇿 NMgr. | Faculty of Arts
- Comparative Literature — East European Studies🇨🇿 NMgr. | Faculty of Arts
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Anthropological studies with specialisation in Philosophical anthropology🇨🇿 NMgr. | Faculty of Humanities