- Ancient Egypt and the Near East🇨🇿 Bc. | Faculty of Arts
- Media and Area studies🇬🇧 NMgr. | Faculty of Social Sciences
- Orthotics - Prosthetics🇨🇿 Bc. | Faculty of Physical Education and Sport
- Sociology with specialisation in Sociology, Public and Politics🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Social Anthropology and Qualitative Research🇨🇿 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Applied Research and Its Methodology🇨🇿 NMgr. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Germanic and North European Studies with specialisation in Finnish Studies with double curriculum study History – General History with specialisation in International Relations in the Context of Contemporary History🇨🇿 NMgr. | Faculty of Arts
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- History – European Studies🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Germanic and North European Studies with specialisation in Scandinavian Studies🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Germanic and North European Studies with specialisation in Dutch Studies🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Italian Studies🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Political Science🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Intercultural Communication: Translation and Interpreting with specialisation in English for Translation and Interpreting🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study East European Studies with specialisation in Russian🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Religious Studies🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Philosophy🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Archive Studies and Auxiliary Historical Sciences🇨🇿 Bc. | Faculty of Arts
- History – European Studies with double curriculum study Chinese Studies🇨🇿 Bc. | Faculty of Arts
- Italian Studies with double curriculum study History – European Studies🇨🇿 Bc. | Faculty of Arts