- Bioinformatics🇨🇿 NMgr. | Faculty of Science
- Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Sport Management🇨🇿 NMgr. | Faculty of Physical Education and Sport
- Genetics, Molecular Biology and Virology with specialisation in Molecular biology and genetics of eukaryotes🇨🇿 NMgr. | Faculty of Science
- Ecology with specialisation in Terrestrial Ecology🇨🇿 NMgr. | Faculty of Science
- Theoretical and Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Zoology with specialisation in Animal Evolutionary Genetics🇨🇿 NMgr. | Faculty of Science
- Media and Area studies🇬🇧 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences