- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Political Science and International Relations🇨🇿 Bc. | Faculty of Social Sciences
- Geopolitical Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Sociology with specialisation in Sociology🇨🇿 Bc. | Faculty of Arts
- Sociology with specialisation in Sociology with Economics🇨🇿 Bc. | Faculty of Arts
- Political Science and Public Policy🇨🇿 Bc. | Faculty of Social Sciences
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Hispanian Studies with double curriculum study Ibero-American Studies🇨🇿 NMgr. | Faculty of Arts
- Germanic and North European Studies with specialisation in Finnish Studies with double curriculum study Ibero-American Studies🇨🇿 NMgr. | Faculty of Arts
- Ibero-American Studies🇨🇿 NMgr. | Faculty of Arts
- Ibero-American Studies with double curriculum study Translation Studies with specialisation in Translation Studies: Czech – Spanish🇨🇿 NMgr. | Faculty of Arts
- Ibero-American Studies with double curriculum study History – General History with specialisation in International Relations in the Context of Contemporary History🇨🇿 NMgr. | Faculty of Arts
- General Nursing🇨🇿 Bc. | Third Faculty of Medicine
- Law and Jurisprudence🇨🇿 Mgr. | Faculty of Law
- German and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Demography with specialisation in Demography with Economics🇨🇿 Bc. | Faculty of Science
- Demography with specialisation in Demography with Sociology🇨🇿 Bc. | Faculty of Science
- Demography with specialisation in Demography with Social geography🇨🇿 Bc. | Faculty of Science
- Demography with specialisation in Demography with History🇨🇿 Bc. | Faculty of Science
- Demography with specialisation in Demography with Public and social policy🇨🇿 Bc. | Faculty of Science
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Anglophone Literatures and Cultures +1🇨🇿 PhD. | Faculty of Arts
- Intensive Care🇨🇿 NMgr. | Third Faculty of Medicine
