- Computer Science with specialisation in Programming and Software Development +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science with specialisation in Systems Programming +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Law and Jurisprudence🇨🇿 Mgr. | Faculty of Law
- Bioinformatics +1🇨🇿 NMgr. | Faculty of Science
- Medicinal Chemistry🇨🇿 NMgr. | Faculty of Science
- Probability, Mathematical Statistics and Econometrics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics with specialisation in Mathematical Statistics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Teacher Education of Chemistry for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Computer Science with specialisation in Web and Data Oriented Programming +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- New Media Studies🇨🇿 NMgr. | Faculty of Arts
- Psychology🇨🇿 Bc. | Faculty of Arts
- Computer Science with specialisation in General Computer Science +1🇨🇿 Bc. | Faculty of Mathematics and Physics
- Bioorganic Chemistry🇨🇿 PhD. | Faculty of Pharmacy in Hradec Králové
- Organic Chemistry🇨🇿 PhD. | Faculty of Science
- Experimental Surgery🇨🇿 PhD. | Faculty of Medicine in Pilsen
- Public and Social Policy🇨🇿 PhD. | Faculty of Social Sciences
- Computer Science with specialisation in Artificial Intelligence🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computational linguistics +1🇨🇿 PhD. | Faculty of Mathematics and Physics
- Demography +1🇨🇿 NMgr. | Faculty of Science
- Bioinformatics and computational biology +1🇨🇿 PhD. | Faculty of Mathematics and Physics
- Applied Linguistics for Language Teaching +1🇨🇿 PhD. | Faculty of Arts