- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in Area Studies🇨🇿 Bc. | Faculty of Social Sciences
- Sociology with specialisation in Sociology, Public and Politics🇨🇿 NMgr. | Faculty of Social Sciences
- Public and Social Policy Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Geopolitical Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Earth Sciences🇨🇿 Bc. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Biology for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- International Masters in Economy, State and Society with specialisation in Politics and Security🇬🇧 NMgr. | Faculty of Social Sciences
- European Politics and Society: Vaclav Havel Joint Master Programme🇬🇧 NMgr. | Faculty of Social Sciences
- Ecological and Evolutionary Biology🇨🇿 Bc. | Faculty of Science
- Politics, Philosophy and Economics🇬🇧 Bc. | Faculty of Social Sciences
- Teacher Education of Physical Education for Upper Secondary Schools with double curriculum study Teacher Education of Geography for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Physical Education and Sport
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Physical Education for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of History for Lower and Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools with double curriculum study Teacher Education of Mathematics for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- Geography and Cartography🇨🇿 Bc. | Faculty of Science
- Hydrology and Hydrogeology🇨🇿 Bc. | Faculty of Science
- Physical Geography and Geoecology🇨🇿 NMgr. | Faculty of Science
- Geography for Teacher Education🇨🇿 Bc. | Faculty of Science
- Teacher Education of Geography for Upper Secondary Schools🇨🇿 NMgr. | Faculty of Science
- International Relations🇨🇿 NMgr. | Faculty of Social Sciences
- Geography for Teacher Education with double curriculum study Biology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Chemistry for Teacher Education with double curriculum study Biology for Teacher Education🇨🇿 Bc. | Faculty of Science
- Molecular Biology and Biochemistry of Organisms🇨🇿 Bc. | Faculty of Science
- Applied Geobiology🇨🇿 Bc. | Faculty of Science