- Genetics, Molecular Biology and Virology with specialisation in Molecular biology and genetics of eukaryotes🇨🇿 NMgr. | Faculty of Science
- Optics and Optoelectronics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Physics of Condensed Matter and Materials🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Archaelogy of Prehistory and Middle Ages with double curriculum study Intercultural Communication: Translation and Interpreting with specialisation in English for Translation and Interpreting🇨🇿 Bc. | Faculty of Arts
- Sociology with specialisation in Sociology🇨🇿 Bc. | Faculty of Arts
- Sociology with specialisation in Sociology with Economics🇨🇿 Bc. | Faculty of Arts
- Psychology🇨🇿 Bc. | Faculty of Arts
- German Language and Literature — Swedish Studies🇨🇿 Bc. | Faculty of Arts
- Phonetics — German Language and Literature🇨🇿 Bc. | Faculty of Arts
- Surface and Plasma Physics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- History🇨🇿 Bc. | Faculty of Arts
- History – Economic and Social History🇨🇿 NMgr. | Faculty of Arts
- Science🇬🇧 Bc. | Faculty of Science
- Evolutionary Biology🇨🇿 NMgr. | Faculty of Science
- Ecology with specialisation in Terrestrial Ecology🇨🇿 NMgr. | Faculty of Science
- Macromolecular Chemistry🇨🇿 NMgr. | Faculty of Science
- Physical Chemistry with specialisation in Biophysical Chemistry🇨🇿 NMgr. | Faculty of Science
- Physical Chemistry with specialisation in Physical chemistry🇨🇿 NMgr. | Faculty of Science
- Physical Chemistry with specialisation in Modelling of chemical properties of nanostructures and biostructures🇨🇿 NMgr. | Faculty of Science
- Law and Jurisprudence🇨🇿 Mgr. | Faculty of Law
- Theoretical Physics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Physical Education and Sport🇬🇧 NMgr. | Faculty of Physical Education and Sport
- Bioinformatics🇨🇿 NMgr. | Faculty of Science
- Reproduction and Developmental Biology🇨🇿 NMgr. | Faculty of Science
- Cell Biology🇨🇿 NMgr. | Faculty of Science
- Atmospheric Physics, Meteorology and Climatology🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Computational Mathematics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Mathematical Modelling in Physics and Technology🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Mathematics for Information Technologies🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Physics🇨🇿 Bc. | Faculty of Mathematics and Physics