- Physical Geography and Geoecology🇨🇿 NMgr. | Faculty of Science
- Earth Sciences🇨🇿 Bc. | Faculty of Science
- Geology with specialisation in Geology🇨🇿 NMgr. | Faculty of Science
- Geology with specialisation in Geodynamics🇨🇿 NMgr. | Faculty of Science
- Mathematical Analysis🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Reproduction and Developmental Biology🇨🇿 NMgr. | Faculty of Science
- Corporate Strategy and Finance in Europe🇬🇧 NMgr. | Faculty of Social Sciences
- Czech Language and Literature🇨🇿 NMgr. | Faculty of Arts
- Czech Language - Specialization Studies🇨🇿 NMgr. | Faculty of Arts
- Czech Language - Specialization Studies — Latin Language and Literature🇨🇿 NMgr. | Faculty of Arts
- Czech Language - Specialization Studies — General Linguistics🇨🇿 NMgr. | Faculty of Arts
- Economics and Finance with specialisation in Central Banking and Financial Regulation🇨🇿 NMgr. | Faculty of Social Sciences
- Economics and Finance with specialisation in Financial Markets and Data Analysis🇨🇿 NMgr. | Faculty of Social Sciences
- Economics and Finance with specialisation in Banking and Corporate Finance🇨🇿 NMgr. | Faculty of Social Sciences
- Economics and Finance with specialisation in Economics of Public Sector and Health Care🇨🇿 NMgr. | Faculty of Social Sciences
- Geotechnology🇨🇿 Bc. | Faculty of Science
- Computational Mathematics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Probability, Mathematical Statistics and Econometrics with specialisation in Theory of Probability🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Master in Economic Research🇨🇿 NMgr. | Faculty of Social Sciences
- Applied physiotherapy🇨🇿 NMgr. | Second Faculty of Medicine
- Media and Area studies🇬🇧 NMgr. | Faculty of Social Sciences
- Modelling of Chemical Properties on Nano- and Biostructures🇨🇿 PhD. | Faculty of Science
- Social Medicine +1🇨🇿 PhD. | Faculty of Medicine in Pilsen
- Mathematical Modelling🇨🇿 Bc. | Faculty of Mathematics and Physics
- Mathematical Modelling in Physics and Technology🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Computer Science - Software Systems🇨🇿 PhD. | Faculty of Mathematics and Physics
- Bioinformatics and computational biology🇨🇿 PhD. | Faculty of Mathematics and Physics
- Atmospheric physics, meteorology and climatology🇨🇿 PhD. | Faculty of Mathematics and Physics