- General Mathematics🇨🇿 Bc. | Faculty of Mathematics and Physics
- Mathematics for Information Technologies🇨🇿 Bc. | Faculty of Mathematics and Physics
- Mathematical Modelling🇨🇿 Bc. | Faculty of Mathematics and Physics
- Computer Science - Visual Computing and Game Development🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Humanities and Social Sciences🇨🇿 Bc. | Faculty of Humanities
- Physics of Condensed Matter and Materials🇨🇿 NMgr. | Faculty of Mathematics and Physics
- Area Studies with specialisation in Balkan, Eurasian and Central European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in German and Austrian Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in North American Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Area Studies with specialisation in West European Studies🇨🇿 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Russian and Eurasian Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Balkan, Eurasian and Central European Studies with specialisation in Balkan and Central European Studies🇬🇧 NMgr. | Faculty of Social Sciences
- Master in Area Studies🇬🇧 NMgr. | Faculty of Social Sciences
- International Masters in Economy, State and Society with specialisation in History and Society🇬🇧 NMgr. | Faculty of Social Sciences
- Geoinformatics, Cartography and Remote Sensing🇨🇿 NMgr. | Faculty of Science