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Actinobacterial community dominated by a distinct clade in acidic soil of a waterlogged deciduous forest

Publication at Faculty of Mathematics and Physics |
2011

Abstract

The relationship between the actinobacterial community composition and environmental factors was assessed in two soil horizons in the summer and winter seasons using a taxonomic microarray and cloning-sequencing of 16S rRNA genes. The community differing significantly between horizons and seasons was characterized by high incidence (80%) of a separate clade sharing an ancestral node with Streptosporangineae, and, in the upper horizon, also of the genus Mycobacterium.