- Three-gene phylogeny of the genus Arthroderma: Basis for future taxonomic studies2021 | Faculty of Science
- Aspergillus is monophyletic: Evidence from multiple gene phylogenies and extrolites profiles2017 | Faculty of Science
- Diversity and Phylogenetic Position of Bothrostoma Stokes, 1887 (Ciliophora: Metopida), with Description of Four New Species2022 | Faculty of Science
- Polyphasic taxonomy of Aspergillus section Aspergillus (formerly Eurotium), and its occurrence in indoor environments and food2017 | Faculty of Science
- Physcraper: a Python package for continually updated phylogenetic trees using the Open Tree of Life2021 | Faculty of Science
- A wide diversity of previously undetected free-living relatives of diplomonads isolated from marine/saline habitats2010 | Faculty of Science
- Description of Three New Genera of Metopidae (Metopida, Ciliophora): Pileometopus gen. nov., Castula gen. nov., and Longitaenia gen. nov., with Notes on the Phylogeny and Cryptic Diversity of Metopid Ciliates2020 | Faculty of Science
- Marine Isolates of Trimastix marina Form a Plesiomorphic Deep-branching Lineage within Preaxostyla, Separate from Other Known Trimastigids (Paratrimastix n. gen.)2015 | Faculty of Science
- Evolution of moth sex pheromone composition by a single amino acid substitution in a fatty acid desaturase2015 | Faculty of Pharmacy in Hradec Králové
- Population biology of hedgehog fungus Trichophyton erinaceiPublication without faculty affiliation
- Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods2023 | Faculty of Science, Central Library of Charles University
- Host-driven subspeciation in the hedgehog fungus, Trichophyton erinacei, an emerging cause of human dermatophytosis2022 | Faculty of Science, First Faculty of Medicine
- Taxonomy of Aspergillus series Versicolores: Species reduction and lessons learned about intraspecific variability2022 | Faculty of Science, Central Library of Charles University