- Language of Living beings - on theory of biosemantics2007 | Faculty of Science
- Living as Languaging: Distributed Knowledge in Living Beings2013 | Faculty of Science
- Cutting down the Porphyrian tree: Objective reality as created by the innerness of living beings2020 | Faculty of Science
- Hermeneutics by the Living2011 | Faculty of Science
- Empedocles' Sphairos and Its Interpretations in Antiquity III : Zoogony and Plato's Symposium2016 | Faculty of Science
- Silencing / Unsilencing Nature: A Participatory Visual Essay on the Right to Flourish2021 | Faculty of Social Sciences
- Empedocles' Sphairos2017 | Faculty of Science
- Language metaphor of the living2010 | Faculty of Science
- Biosemiotics and the collision of modernism with postmodernity2010 | Faculty of Science
- Anaximander of Miletus and Evolution2010 | Faculty of Science
- Evolution by Meaning Attribution: Notes on Biosemiotic Interpretations of Extended Evolutionary Synthesis2018 | Faculty of Science
- Life as its own designer : Darwin’s Origin and Western thought2009 | Faculty of Science, Faculty of Arts
- Evolution born moist: Analogies and parallels of Anaximander's primeval evolution and Darwinian evolution2011 | Faculty of Science
- The Presocratics, Plato, and Aristotle's Biology2021 | Faculty of Arts
- Content Analysis of Czech School Biology Textbook with Regard to Human Evolution Topics2017 | Faculty of Science, Central Library of Charles University, Faculty of Education
- Evolution, lineages and human language2019 | Faculty of Science
- World and Nature in the Early Phenomenology of Jan Patočka2019 | Faculty of Humanities
- The Philosophy of Living Nature2016 | Faculty of Science
- Canguilhem and Jacob on the Living2014 | Faculty of Arts
- Aristotle on the Nature in the Pneuma and the First Body2020 | Faculty of Arts
- The Limits of Knowledge, the Limits of Exclusion : On Franz Kafka's The Trial and The Castle2021 | Faculty of Arts
- A new Frontier for Organismal Biology2023 | Faculty of Science
- Heat, Pneuma, and Soul in Ancient Philosophy and Science2020 | Faculty of Arts
- Mutual understanding and misunderstanding in biological systems mediated by self-representational meaning of organisms2009 | Faculty of Science
- Is a world without animals possible2014 | Faculty of Humanities
- What does it mean to objectify in thinking?2022 | Faculty of Arts
- The Symbiotic Universe: Event Horizon for Biology2014 | Faculty of Science
- The Emergence of Subjectivity within Life2016 | Faculty of Arts
- Life2018 | Protestant Theological Faculty
- Rituals of termination and renewal2021 | Faculty of Science