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Search for publications relevant for "Molecular dynamics (MD) simulations"
Molecular dynamics (MD) simulations
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publication
QM and QM/MM umbrella sampling MD study of the formation of Hg(II)-thymine bond: Model for evaluation of the reaction energy profiles in solutions with constant pH
2020 |
Faculty of Mathematics and Physics
publication
Amiridine-piperazine hybrids as cholinesterase inhibitors and potential multitarget agents for Alzheimer's disease treatment
2021 |
Publication without faculty affiliation
publication
Computer modeling of biomolecules
2011 |
Faculty of Mathematics and Physics
publication
The influence of gadolinium concentration on the twin propagation rate in magnesium alloys
2023 |
Faculty of Mathematics and Physics, Central Library of Charles University
publication
Rotational and translational dynamics of CO2 adsorbed in MOF Zn-2(bdc)(2)(dabco)
2015 |
Faculty of Mathematics and Physics
publication
RNA- based boronate internucleosidic linkages: an entry into reversible templated ligation and loop formation
2018 |
Faculty of Mathematics and Physics
publication
Neutralization of lenvatinib charge hampers encapsulation into ferritin nanocages
2019 |
Faculty of Mathematics and Physics, Faculty of Science
publication
Structure and dynamics of the hyaluronan oligosaccharides and their solvation shell in water: Organic mixed solvents
2023 |
Faculty of Science, Central Library of Charles University
publication
Molecular Dynamics with Helical Periodic Boundary Conditions
2014 |
Faculty of Science
publication
Recrystallization of thin Fe-based nanocrystalline films
2023 |
Faculty of Mathematics and Physics
publication
Salt-dependent intermolecular interactions of hyaluronan molecules mediate the formation of temporary duplex structures
2022 |
Faculty of Science
publication
On the Association of the Base Pairs on the Silica Surface Based on Free Energy Biased Molecular Dynamics Simulation and Quantum Mechanical Calculations
2013 |
Faculty of Science
publication
Effect of Polycation Structure on Interaction with Lipid Membranes
2017 |
First Faculty of Medicine
publication
FT-IR and FT-Raman characterization and investigation of reactive properties of N-(3-iodo-4-methylphenyl)pyrazine-2-carboxamide by molecular dynamics simulations and DFT calculations
2017 |
Faculty of Pharmacy in Hradec Králové
publication
Functionalization of the Parylene C Surface Enhances the Nucleation of Calcium Phosphate: Combined Experimental and Molecular Dynamics Simulations Approach
2020 |
Faculty of Science, Central Library of Charles University
publication
Modulation of Anionic Lipid Bilayers by Specific Interplay of Protons and Calcium Ions
2022 |
Faculty of Mathematics and Physics, Central Library of Charles University
publication
Dynamics of transition dipole moment orientation in representative fluorescent proteins
2023 |
First Faculty of Medicine
publication
A Computational Study of the Glycine-Rich Loop of Mitochondrial Processing Peptidase
2013 |
Faculty of Science
publication
Structural Changes in Ceramide Bilayers Rationalize Increased Permeation through Stratum Corneum Models with Shorter Acyl Tails
2015 |
Faculty of Pharmacy in Hradec Králové
publication
When Two Become One: Conformational Changes in FXR/RXR Heterodimers Bound to Steroidal Antagonists
2023 |
Faculty of Science, Faculty of Pharmacy in Hradec Králové
publication
Understanding the wetting of transition metal dichalcogenides from an ab initio perspective
2023 |
Faculty of Mathematics and Physics
publication
Explaining the striking difference in twist-stretch coupling between DNA and RNA: A comparative molecular dynamics analysis
2015 |
Faculty of Science
publication
In Silico Identification and Validation of Organic Triazole Based Ligands as Potential Inhibitory Drug Compounds of SARS-CoV-2 Main Protease
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2021 |
Faculty of Science
publication
Dynamic study of small toxic hydrophobic proteins PepA1 and PepG1 of Staphylococcus aureus
2022 |
Faculty of Science, First Faculty of Medicine, Central Library of Charles University
publication
Thermodynamics of the ion association of potassium cobalt(III) bis(1,2-dicarbollide) in acetonitrile, methanol and dimethyl sulfoxide
2023 |
Faculty of Science
publication
Computer modeling of polymer stars in variable solvent conditions: a comparison of MD simulations, self-consistent field (SCF) modeling and novel hybrid Monte Carlo SCF approach
2021 |
Faculty of Science
publication
Mapping of CaM, S100A1 and PIP2-Binding Epitopes in the Intracellular N- and C-Termini of TRPM4
2020 |
Faculty of Mathematics and Physics, First Faculty of Medicine, Faculty of Physical Education and Sport
publication
Effect O6-Guanine Alkylation on DNA Flexibility Studied by Comparative Molecular Dynamics Simulations
2015 |
Faculty of Science
publication
Ionic Strength and Solution Composition Dictate the Adsorption of Cell-Penetrating Peptides onto Phosphatidylcholine Membranes
2022 |
Faculty of Mathematics and Physics, Faculty of Science