- Methods of Protein Structure Alignment2008 | Faculty of Mathematics and Physics
- SProt - From Local to Global Protein Structure Similarity2010 | Faculty of Mathematics and Physics
- P3S: Protein Structure Similarity Search2013 | Faculty of Mathematics and Physics
- SProt: sphere-based protein structure similarity algorithm2011 | Faculty of Mathematics and Physics
- On the Effectiveness of Distances Measuring Protein Structure Similarity2009 | Faculty of Mathematics and Physics
- Framework for Protein Structures Conformation Analysis2023 | Faculty of Mathematics and Physics
- Mapping protein structural changes by quantitative cross-linking2015 | Faculty of Science
- Peptide-Binding Site Prediction From Protein Structure via points on the Solvent Accessible Surface2018 | Faculty of Mathematics and Physics
- Comprehensive characterization of amino acid positions in protein structures reveals molecular effect of missense variants2020 | Faculty of Mathematics and Physics
- AHoJ: rapid, tailored search and retrieval of apo and holo protein structures for user-defined ligands2022 | Faculty of Mathematics and Physics, Faculty of Science
- Computer Modelling of Protein Structures and Interactions2007 | Second Faculty of Medicine
- Spectral techniques for rapid quantification of protein structure in solution +12004 | Faculty of Mathematics and Physics
- Impact of Chemical Cross-Linking on Protein Structure and Function2018 | Faculty of Science
- MISCAST: MIssense variant to protein StruCture Analysis web SuiTe2020 | Faculty of Mathematics and Physics
- Parallel subfunctionalisation of PsbO protein isoforms in angiosperms revealed by phylogenetic analysis and mapping of sequence variability onto protein structure2015 | Faculty of Science
- Biophysical approaches to studies of heme protein structurePublication without faculty affiliation
- P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structure2018 | Faculty of Mathematics and Physics
- Protein structural segments and their interconnections derived from optical spectra. Thermal unfolding of Ribonuclease T1 as an example1996 | Faculty of Mathematics and Physics
- Alignment-Based Extension to DDPIn Feature Extraction2010 | Faculty of Mathematics and Physics
- On the Parallelization of the SProt Measure and the TM-score Algorithm2013 | Faculty of Mathematics and Physics
- PrankWeb 3: accelerated ligand-binding site predictions for experimental and modelled protein structures2022 | Faculty of Mathematics and Physics, Faculty of Science
- Delineation of functionally essential protein regions for 242 neurodevelopmental genes2022 | Faculty of Mathematics and Physics
- PDBe-KB: collaboratively defining the biological context of structural data2022 | Faculty of Mathematics and Physics
- Mapping Conformational Space of All 8000 Tripeptides by Quantum Chemical Methods: What Strain Is Affordable within Folded Protein Chains?2021 | Central Library of Charles University
- Chemistry and mass spectrometry applied to protein microidentification2002 | Faculty of Science
- Framework for knowledge-based prediction of protein-protein interaction sites2018 | Faculty of Mathematics and Physics
- On Metric Approximations of the SProt Measure2011 | Faculty of Mathematics and Physics
- The Structure of Myristoylated Mason-Pfizer Monkey Virus Matrix Protein and the Role of Phosphatidylinositol-(4,5)-Bisphosphate in Its Membrane Binding2012 | Faculty of Mathematics and Physics
- Inherited ichthyoses: molecular causes of the disease in Czech patients2019 | Publication without faculty affiliation